STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000001099annotation not available (161 aa)    
Predicted Functional Partners:
TRIT1
TRNA dimethylallyltransferase.
 
      0.900
GTPBP6
GTP binding protein 6 (putative).
  
  
 0.774
GART
annotation not available
     
 0.742
ENSCPBP00000007218
Trifunctional purine biosynthetic protein adenosine-3-like.
     
 0.742
YBEY
YbeY metallopeptidase (putative).
  
  
 0.711
YARS1
Tyrosyl-tRNA synthetase.
   
  
 0.707
FTSJ1
TRNA (cytidine32/guanosine34-2'-O)-methyltransferase.
  
  
 0.693
VARS1
Valyl-tRNA synthetase.
  
  
 0.652
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
  
  
 0.629
METTL1
TRNA (guanine-N7-)-methyltransferase.
  
 
 0.617
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.