STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOR4ATorsin family 4 member A. (426 aa)    
Predicted Functional Partners:
PTPN23
Protein tyrosine phosphatase, non-receptor type 23.
   
 
 0.598
SUMF1
Formylglycine-generating enzyme.
      
 0.581
TMEM59L
Transmembrane protein 59 like.
      
 0.575
COPS4
COP9 signalosome complex subunit 4.
   
  0.505
STON2
Stonin-1/2.
    
  0.499
PSMF1
Proteasome inhibitor subunit 1 (PI31).
      
 0.499
COPS2
COP9 signalosome complex subunit 2.
   
 
  0.487
COPS8
COP9 signalosome complex subunit 8.
   
 
  0.473
SPG20
Spastic paraplegia 20 (Troyer syndrome).
      
 0.461
ENSCPBP00000040501
annotation not available
      
 0.461
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.