STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000001106annotation not available (67 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.812
BABAM1
BRISC and BRCA1 A complex member 1.
    
 0.812
BABAM2
Brain and reproductive organ-expressed (TNFRSF1A modulator).
    
 0.812
BRCA1
Breast cancer type 1 susceptibility protein homolog.
    
 0.745
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
  0.642
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.606
FAU
FAU, ubiquitin like and ribosomal protein S30 fusion.
    
  0.605
PAXIP1
PAX interacting protein 1.
    
 0.565
TP53BP1
Tumor suppressor p53-binding protein 1.
    
 0.524
RNF8
E3 ubiquitin-protein ligase RNF8.
     
 0.474
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.