STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000001124annotation not available (656 aa)    
Predicted Functional Partners:
BRCA1
Breast cancer type 1 susceptibility protein homolog.
   
 0.858
RBBP8
RB binding protein 8, endonuclease.
    
 0.816
MRE11
MRE11 homolog, double strand break repair nuclease.
   
 0.733
TOPBP1
Topoisomerase (DNA) II binding protein 1.
    
 0.730
NBN
Nibrin.
    
 0.716
BRCA2
BRCA2 DNA repair associated.
    
 0.634
RAD51
DNA repair protein RAD51.
   
 0.627
RAD50
RAD50 double strand break repair protein.
    
 0.620
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
  0.611
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.606
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.