STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPEARThrombospondin type laminin G domain and EAR repeats. (641 aa)    
Predicted Functional Partners:
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 0.623
ESPN
Espin.
    
 0.587
PCDH15
Protocadherin related 15.
     
 0.579
SMPX
Small muscle protein, X-linked.
      
 0.578
KRTCAP3
Keratinocyte associated protein 3.
      
 0.576
KLHL29
Kelch like family member 29.
      
 0.567
GPSM2
G-protein signaling modulator 2.
     
 0.559
HDHD3
Haloacid dehalogenase like hydrolase domain containing 3.
      
 0.553
HSD17B4
Hydroxysteroid 17-beta dehydrogenase 4.
   
  
 0.548
BCL3
BCL3 transcription coactivator.
    
 0.491
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.