STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000001160HLA class II histocompatibility antigen, DR beta 5 chain-like. (77 aa)    
Predicted Functional Partners:
CD74
CD74 molecule.
   
 0.819
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 0.655
ENSCPBP00000010910
HLA class II histocompatibility antigen, DM beta chain.
   
 0.644
RPS14
Small subunit ribosomal protein S14e.
   
 0.637
ENSCPBP00000027968
annotation not available
   
 0.637
ENSCPBP00000009541
annotation not available
    
 
 0.593
ENSCPBP00000037730
annotation not available
   
  0.497
ACAN
Aggrecan.
    
 0.494
FGB
Fibrinogen beta chain.
    
  0.488
ENSCPBP00000017585
annotation not available
   
  0.449
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.