STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG5Secretogranin V. (203 aa)    
Predicted Functional Partners:
PCSK2
Proprotein convertase subtilisin/kexin type 2.
   
 
 0.861
SCG3
Secretogranin III.
   
  
 0.624
CHGB
Chromogranin B.
   
  
 0.614
SCG2
Secretogranin II.
   
  
 0.609
ARHGAP11A
Rho GTPase activating protein 11A.
 
    
 0.543
PAM
Peptidylglycine monooxygenase / peptidylamidoglycolate lyase.
   
  
 0.519
PCSK7
Proprotein convertase subtilisin/kexin type 7.
   
 
 0.471
PCSK1
Proprotein convertase subtilisin/kexin type 1.
   
 
 0.436
SNAP25
Synaptosomal-associated protein 25.
   
  
 0.411
MBTPS1
Membrane bound transcription factor peptidase, site 1.
   
 
 0.410
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.