STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000001186annotation not available (139 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
    
   0.946
RPF2
Ribosome production factor 2 homolog.
   
   0.917
NOB1
NIN1/PSMD8 binding protein 1 homolog.
   
  
 0.886
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.880
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.868
PUM3
Pumilio homology domain family member 6.
   
 
 0.868
BYSL
Essential nuclear protein 1.
   
 
 0.867
UTP23
U3 small nucleolar RNA-associated protein 23.
   
 
 0.863
BRIX1
Ribosome biogenesis protein BRX1.
   
   0.857
SIRT1
NAD+-dependent protein deacetylase sirtuin 1.
    
 0.855
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.