STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTRA1HtrA serine peptidase 1. (524 aa)    
Predicted Functional Partners:
SCP2
Sterol carrier protein 2.
    
 0.949
KATNAL2
Katanin p60 ATPase-containing subunit A1.
   
 0.744
BIRC6
Baculoviral IAP repeat-containing protein 6 (apollon).
    
 0.743
PSMD1
26S proteasome regulatory subunit N2.
    
 0.738
ENSCPBP00000031803
annotation not available
  
 
 0.688
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.674
PSMD12
Proteasome 26S subunit, non-ATPase 12.
    
 0.670
ECI2
Delta3-Delta2-enoyl-CoA isomerase.
    
 0.664
PSMD2
26S proteasome regulatory subunit N1.
    
 0.655
XIAP
E3 ubiquitin-protein ligase XIAP.
    
 0.635
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.