STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERT1Collagen type IV alpha 3 binding protein. (624 aa)    
Predicted Functional Partners:
VAPA
Vesicle-associated membrane protein-associated protein A.
    
 0.755
CSNK1G1
Casein kinase 1 gamma 1.
    
 0.658
CSNK1G3
Casein kinase 1 gamma 3.
    
 0.658
CSNK1G2
Casein kinase 1 gamma 2.
    
 0.658
STARD3
StAR related lipid transfer domain containing 3.
      
 0.625
VAPB
Vesicle-associated membrane protein-associated protein B.
    
 0.623
STAR
Steroidogenic acute regulatory protein, mitochondrial.
      
 0.602
STARD5
StAR related lipid transfer domain containing 5.
      
 0.593
STARD7
StAR-related lipid transfer protein 7, mitochondrial.
      
 0.592
DCAF11
DDB1- and CUL4-associated factor 11.
   
  
 0.580
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.