STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAVER2Ribonucleoprotein, PTB binding 2. (813 aa)    
Predicted Functional Partners:
FAU
FAU, ubiquitin like and ribosomal protein S30 fusion.
   
   0.661
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.569
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 
 0.506
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
    
 0.451
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.439
APOBEC2
Apolipoprotein B mRNA editing enzyme catalytic subunit 2.
     
 0.427
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.421
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.421
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.413
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.404
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.