STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGFBR1Transforming growth factor beta receptor 1. (440 aa)    
Predicted Functional Partners:
TGFBR2
Transforming growth factor beta receptor 2.
   
0.998
TGFB3
Transforming growth factor beta 3.
    
 0.996
TGFB1
Transforming growth factor beta 1.
    
 0.995
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
    
 0.995
SMAD7
SMAD family member 7.
   
 0.982
TGFB2
Transforming growth factor beta 2.
    
 0.977
BAMBI
BMP and activin membrane bound inhibitor.
    
 0.977
SMURF1
SMAD specific E3 ubiquitin protein ligase 1.
    
 0.977
ENSCPBP00000019186
TGF-beta receptor type-2-like.
   
0.974
GDF11
Growth differentiation factor 11.
    
 0.973
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.