STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP3Low-density lipoprotein receptor-related protein 3/10/12. (832 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.671
RELN
Reelin.
    
 0.519
ITSN1
Intersectin 1.
    
 0.512
APLP1
Amyloid beta precursor like protein 1.
    
 0.497
HSPG2
Heparan sulfate proteoglycan 2.
    
0.459
AGRN
Agrin.
    
 0.459
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.429
FKRP
Fukutin related protein.
     
 0.416
CCNE1
G1/S-specific cyclin-E1.
      
 0.416
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.403
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.