STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKDD1BAnkyrin repeat and death domain containing 1B. (484 aa)    
Predicted Functional Partners:
RNF146
E3 ubiquitin-protein ligase RNF146.
    
 0.621
AXIN1
Axin 1.
    
 0.616
AXIN2
Axin 2.
    
 0.616
CDH24
Cadherin 24.
    
 0.584
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.502
GAK
Cyclin G associated kinase.
   
 0.501
TPTE2
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2.
   
 0.494
PTEN
Phosphatase and tensin homolog.
   
 0.494
MOB3C
MOB kinase activator 3C.
      
 0.485
YKT6
YKT6 v-SNARE homolog (S. cerevisiae).
    
  0.467
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.