STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000001398Macrophage migration inhibitory factor-like. (115 aa)    
Predicted Functional Partners:
TAT
Tyrosine aminotransferase.
     
 0.914
GOT1
Aspartate aminotransferase, cytoplasmic.
   
 
 0.910
HPD
4-hydroxyphenylpyruvate dioxygenase.
     
 0.910
GOT2
Aspartate aminotransferase, mitochondrial.
   
 
 0.908
ENSCPBP00000001414
Macrophage migration inhibitory factor.
  
  
 
0.901
CD74
CD74 molecule.
   
 0.810
RPS14
Small subunit ribosomal protein S14e.
   
 0.620
ENSCPBP00000027968
annotation not available
   
 0.620
COPS5
COP9 signalosome complex subunit 5.
    
 
 0.561
CXCR4
C-X-C motif chemokine receptor 4.
      
 0.536
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.