STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC5Centrosomal protein POC5. (538 aa)    
Predicted Functional Partners:
CETN3
Centrin 3.
    
 
 0.847
FAM161A
Family with sequence similarity 161 member A.
    
 
 0.607
WDR90
WD repeat domain 90.
    
 
 0.581
IARS2
Isoleucyl-tRNA synthetase 2, mitochondrial.
      
 0.571
SPICE1
Spindle and centriole associated protein 1.
      
 0.568
CEP120
Centrosomal protein CEP120.
   
  
 0.563
CEP89
Centrosomal protein CEP89.
      
 0.556
ENSCPBP00000006195
Centrin-2.
    
 
 0.529
ENSCPBP00000016442
Caltractin-like.
    
 
 0.529
ENSCPBP00000035384
Caltractin.
    
 
 0.529
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.