STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC6Leucine rich repeat containing 6. (476 aa)    
Predicted Functional Partners:
ZMYND10
Zinc finger MYND domain-containing protein 10.
    
 0.733
DNAI1
Dynein intermediate chain 1, axonemal.
  
 
 
 0.675
DNAI2
Dynein intermediate chain 2, axonemal.
    
 
 0.625
ADGRL1
Adhesion G protein-coupled receptor L1.
    
 
 0.623
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 
 0.623
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 
 0.623
CCDC39
Coiled-coil domain containing 39.
   
 0.621
RSPH4A
Radial spoke head protein 6 homolog A-like.
   
 
 0.594
CCDC40
Coiled-coil domain containing 40.
   
 
 0.591
CCDC65
Coiled-coil domain containing 65.
   
  
 0.591
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.