STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYBPC1Myosin binding protein C, slow type. (1023 aa)    
Predicted Functional Partners:
WDR18
WD repeat domain 18.
   
 0.613
TNNC1
Troponin C, slow skeletal and cardiac muscles.
   
 0.600
TNNI2
Troponin I, fast skeletal muscle.
   
 
 0.597
TEX10
Pre-rRNA-processing protein IPI1.
   
 0.580
MYL3
Myosin light chain 3.
   
 0.580
MYL4
Myosin light chain 4.
   
 0.580
NEB
Nebulin.
   
 0.562
ACTN2
Actinin alpha 2.
   
 0.560
ACTN3
Actinin alpha 2/3.
   
 0.560
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.551
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.