STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX51ATP-dependent RNA helicase DDX51/DBP6. (742 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.774
WDR12
Ribosome biogenesis protein.
   
 0.711
EBNA1BP2
RRNA-processing protein EBP2.
   
 0.704
MTREX
ATP-dependent RNA helicase DOB1.
   
 0.696
NOP58
NOP58 ribonucleoprotein.
  
 
 0.689
SF3B1
Splicing factor 3B subunit 1.
   
 0.675
WDR61
WD repeat-containing protein 61.
    
 0.671
EIF4A3
Eukaryotic translation initiation factor 4A3.
  
0.665
ENSCPBP00000001186
annotation not available
   
 
 0.662
PPIH
Peptidyl-prolyl isomerase H (cyclophilin H).
  
 0.662
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.