STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT2Synaptotagmin 2. (423 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein 25.
   
 0.942
STON2
Stonin-1/2.
   
 0.868
ENSCPBP00000008860
Synaptosomal-associated protein 25-like.
   
 0.860
VAMP1
Vesicle associated membrane protein 1.
   
 0.761
VAMP2
Vesicle associated membrane protein 2.
   
 0.761
ENSCPBP00000027183
Vesicle-associated membrane protein 2-like.
   
 0.761
ENSCPBP00000015069
annotation not available
    
 0.732
VAMP3
Vesicle associated membrane protein 3.
    
 0.732
S100A13
S100 calcium binding protein A13.
    
 
 0.730
SLC18A3
Solute carrier family 18 member A3.
     
 0.727
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.