STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN7L1Ataxin 7 like 1. (789 aa)    
Predicted Functional Partners:
USP22
Ubiquitin carboxyl-terminal hydrolase 22/27/51.
    
 0.943
TAF9
Transcription initiation factor TFIID subunit 9.
    
 0.938
TAF10
Transcription initiation factor TFIID subunit 10.
    
 0.937
TRRAP
Transformation/transcription domain associated protein.
    
 0.935
TADA3
Transcriptional adapter 3.
    
 0.926
ENY2
ENY2, transcription and export complex 2 subunit.
    
 0.910
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.907
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 0.887
TAF6
Transcription initiation factor TFIID subunit 6.
   
 0.881
ATXN7L3
SAGA-associated factor 11.
    
 0.876
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.