STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYCP3Synaptonemal complex protein 3. (260 aa)    
Predicted Functional Partners:
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
   
 
 0.940
REC8
REC8 meiotic recombination protein.
    
 0.745
CENPS
Centromere protein S.
     
 0.696
SPO11
SPO11, initiator of meiotic double stranded breaks.
      
 0.695
MSH4
mutS homolog 4.
    
 
 0.693
SYCP1
Synaptonemal complex protein 1.
    
 0.688
MLH1
DNA mismatch repair protein MLH1.
      
 0.656
SYCE3
Synaptonemal complex central element protein 3.
     
 0.645
SYCE2
Synaptonemal complex central element protein 2.
     
 0.644
SYCP2L
Synaptonemal complex protein 2 like.
    
 0.614
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.