Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDC80NDC80, kinetochore complex component. (638 aa)    
Predicted Functional Partners:
NUF2
NUF2, NDC80 kinetochore complex component.
   
 0.999
SPC25
SPC25, NDC80 kinetochore complex component.
   
 0.997
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.997
SPC24
SPC24, NDC80 kinetochore complex component.
   
 0.993
DSN1
DSN1 homolog, MIS12 kinetochore complex component.
   
 0.990
ENSCPBP00000018691
annotation not available
   
 0.988
MIS12
Kinetochore-associated protein MIS12.
   
 0.983
NSL1
NSL1, MIS12 kinetochore complex component.
   
 0.980
KNL1
Kinetochore scaffold 1.
   
 0.979
TTK
Serine/threonine-protein kinase TTK/MPS1.
   
 
 0.977
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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