STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA20Spermatogenesis associated 20. (777 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthetase.
    
  0.858
HMBS
Hydroxymethylbilane synthase.
    
  0.839
SPATA17
Spermatogenesis associated 17.
      
 0.579
SPATA6
Spermatogenesis-associated protein 6.
      
 0.577
COASY
Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.
      
 0.574
ENSCPBP00000031588
Diamine acetyltransferase 2-like.
     
 0.569
PUSL1
Pseudouridylate synthase-like 1.
      
 0.565
SPATA22
Spermatogenesis associated 22.
      
 0.543
SPATA4
Spermatogenesis associated 4.
      
 0.530
SPATA7
Spermatogenesis-associated protein 7.
      
 0.479
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.