STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDX3Peroxiredoxin 3. (257 aa)    
Predicted Functional Partners:
PRDX5
Peroxiredoxin 5.
   
 0.903
TXN2
Thioredoxin 1.
  
 0.884
SRXN1
Sulfiredoxin 1.
   
 0.872
NDUFS1
NADH dehydrogenase (ubiquinone) Fe-S protein 1.
   
  
 0.833
TXN
Thioredoxin 1.
  
 0.827
NME8
NME/NM23 family member 8.
  
 0.823
ENSCPBP00000010841
annotation not available
  
 0.778
NME9
NME/NM23 family member 9.
  
 0.689
CAT
Catalase.
  
 
 0.674
SOD2
Superoxide dismutase, Fe-Mn family.
  
 
 0.672
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.