STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS7Pseudouridylate synthase 7 (putative). (714 aa)    
Predicted Functional Partners:
RPUSD2
RNA pseudouridylate synthase domain containing 2.
    
 
 0.851
NOC3L
NOC3 like DNA replication regulator.
   
   0.847
PUS3
TRNA pseudouridine38/39 synthase.
   
 
 0.820
MRPL15
Large subunit ribosomal protein L15.
   
   0.813
NSUN2
NOP2/Sun RNA methyltransferase family member 2.
   
 
 0.813
MRPL13
Large subunit ribosomal protein L13.
   
   0.803
MTG1
Mitochondrial ribosome associated GTPase 1.
   
   0.798
MRPL17
Large subunit ribosomal protein L17.
   
   0.795
MRPL43
Mitochondrial ribosomal protein L43.
   
   0.785
GTPBP3
GTP binding protein 3 (mitochondrial).
   
   0.785
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.