STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GNPTABN-acetylglucosamine-1-phosphate transferase alpha and beta subunits. (1264 aa)    
Predicted Functional Partners:
GNPTG
N-acetylglucosamine-1-phosphate transferase, gamma subunit.
    
 0.954
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
     
 0.698
PRKCSH
Protein kinase C substrate 80K-H.
    
 
 0.565
SYCP1
Synaptonemal complex protein 1.
    
 0.495
HEXA
Hexosaminidase subunit alpha.
      
 0.483
AP4E1
Adaptor related protein complex 4 epsilon 1 subunit.
    
 
 0.471
HEXB
Hexosaminidase subunit beta.
      
 0.469
MBTPS1
Membrane bound transcription factor peptidase, site 1.
    
 0.461
ADK
Adenosine kinase.
    
 
 0.460
MDH2
Malate dehydrogenase 2.
    
 
 0.407
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.