STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEBPACCAAT/enhancer binding protein (C/EBP), alpha. (324 aa)    
Predicted Functional Partners:
CDK2
Cyclin dependent kinase 2.
    
 0.678
CDK3
Cyclin dependent kinase 3.
    
 0.678
CDK4
Cyclin dependent kinase 4.
    
 0.645
CDK6
Cyclin dependent kinase 6.
    
 0.645
E2F1
E2F transcription factor 1.
    
 0.614
COX2
Cytochrome c oxidase subunit II.
    
 0.613
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.599
CDK1
Cyclin dependent kinase 1.
    
 0.560
COX7C
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.559
SPI1
Transcription factor PU.1.
   
 0.543
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.