STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WASHC3WASH complex subunit CCDC53. (202 aa)    
Predicted Functional Partners:
WASHC1
WAS protein family homolog 1.
    
 
 0.931
WASHC5
WASH complex subunit strumpellin.
    
 
 0.882
WASHC4
WASH complex subunit 4.
    
 
 0.857
ENSCPBP00000008190
annotation not available
    
 
 0.838
HSBP1
Heat shock factor binding protein 1.
    
 
 0.838
WASHC2C
WASH complex subunit FAM21.
    
 
 0.753
ENSCPBP00000018747
annotation not available
    
 
 0.753
RCSD1
CapZ-interacting protein.
    
 
 0.658
KLHL42
Kelch like family member 42.
      
 0.576
LRRC61
Leucine rich repeat containing 61.
      
 0.576
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.