STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXODecapping exoribonuclease. (394 aa)    
Predicted Functional Partners:
XRN2
5'-3' exoribonuclease 2.
   
 
 0.996
EXOSC7
Exosome complex component RRP42.
   
   0.947
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
    
 
 0.851
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
    
 
 0.851
FBF1
Fas binding factor 1.
    
 
 0.851
RPRD2
Regulation of nuclear pre-mRNA domain containing 2.
    
 
 0.675
CCDC66
Coiled-coil domain containing 66.
    
 
 0.675
NOL9
Polynucleotide 5'-hydroxyl-kinase GRC3/NOL9.
   
 
 0.613
DCP2
MRNA-decapping enzyme subunit 2.
      
 0.604
SKIV2L
Ski2 like RNA helicase.
   
 
 0.586
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.