STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEPDXaa-Pro dipeptidase. (505 aa)    
Predicted Functional Partners:
RIMKLB
Ribosomal modification protein rimK like family member B.
      
 0.558
MIPEP
Mitochondrial intermediate peptidase.
   
 
 0.549
SUCLA2
Succinate-CoA ligase ADP-forming beta subunit.
   
 
 0.496
RPLP0
Ribosomal protein lateral stalk subunit P0.
    
 
 0.486
PHACTR3
Phosphatase and actin regulator 3.
      
 0.474
DPP3
Dipeptidyl peptidase 3.
   
 
 0.473
TSFM
Ts translation elongation factor, mitochondrial.
   
  
 0.463
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
   
 
 0.440
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.414
AMT
Aminomethyltransferase.
  
 0.414
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.