Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEPDXaa-Pro dipeptidase. (505 aa)    
Predicted Functional Partners:
STK16
Serine/threonine kinase 16.
    
   0.765
PHACTR3
Phosphatase and actin regulator 3.
      
 0.645
AK3
Nucleoside-triphosphate--adenylate kinase.
  
 
 0.621
RIMKLB
Ribosomal modification protein rimK like family member B.
      
 0.615
PGM1
Phosphoglucomutase 1.
   
  
 0.588
SOD1
Superoxide dismutase, Cu-Zn family.
   
 
 0.576
SOD3
Superoxide dismutase, Cu-Zn family.
   
 
 0.576
FASTKD1
FAST kinase domains 1.
   
 
 0.565
DUT
Deoxyuridine triphosphatase.
   
  
 0.529
CNDP2
CNDP dipeptidase 2 (metallopeptidase M20 family).
  
 
 0.523
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.