STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YKT6YKT6 v-SNARE homolog (S. cerevisiae). (198 aa)    
Predicted Functional Partners:
STX5
Syntaxin 5.
    
 0.998
SNAP29
Synaptosomal-associated protein 29.
    
 0.997
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.995
STX7
Syntaxin 7.
   
 0.991
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.991
STX8
Syntaxin 8.
    
 0.991
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.990
BET1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.990
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 0.986
ENSCPBP00000034274
annotation not available
    
 
 0.986
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.