STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF804AZinc finger protein 804A. (1087 aa)    
Predicted Functional Partners:
DDX10
ATP-dependent RNA helicase DDX10/DBP4.
    
 0.593
NOL6
U3 small nucleolar RNA-associated protein 22.
   
 
 0.564
DQX1
ATP-dependent RNA helicase DQX1.
    
 0.555
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43.
    
 0.555
UTP6
U3 small nucleolar RNA-associated protein 6.
    
 
 0.554
RRP36
Ribosomal RNA-processing protein 36.
   
   0.548
BYSL
Essential nuclear protein 1.
    
 
 0.548
NOM1
Nucleolar MIF4G domain-containing protein 1.
   
   0.543
NOP14
NOP14 nucleolar protein.
    
   0.542
UTP25
Digestive organ expansion factor homolog (zebrafish).
    
   0.542
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.