STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRMT2BTRNA (uracil-5-)-methyltransferase. (489 aa)    
Predicted Functional Partners:
TRMT61A
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
  
 0.744
DUS1L
Dihydrouridine synthase 1 like.
  
  
 0.726
TRMT11
TRNA (guanine10-N2)-methyltransferase.
   
  
 0.722
TBL3
U3 small nucleolar RNA-associated protein 13.
   
    0.682
BOP1
Ribosome biogenesis protein ERB1.
   
    0.682
CEP152
Centrosomal protein CEP152.
   
    0.682
TRMU
TRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
  
 0.649
TRMT10A
TRNA (guanine9-N1)-methyltransferase.
   
  
 0.649
YRDC
YrdC N6-threonylcarbamoyltransferase domain containing.
  
  
 0.631
NAT10
N-acetyltransferase 10.
  
  
 0.627
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.