STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD8BT-cell surface glycoprotein CD8 beta chain. (193 aa)    
Predicted Functional Partners:
CD8A
T-cell surface glycoprotein CD8 alpha chain.
   
0.993
ENSCPBP00000004224
annotation not available
   
0.934
ENSCPBP00000006186
annotation not available
   
0.934
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 
 0.846
ENSCPBP00000029627
T-cell surface glycoprotein CD3 gamma chain-like.
   
 
 0.802
CD4
T-cell surface glycoprotein CD4.
   
 
 0.707
ENSCPBP00000003444
Class I histocompatibility antigen, F10 alpha chain-like.
   
 
  0.697
ENSCPBP00000008251
Major histocompatibility complex class I-related gene protein-like.
   
 
  0.697
ENSCPBP00000010741
Class I histocompatibility antigen, F10 alpha chain-like.
   
 
  0.697
ENSCPBP00000016918
Major histocompatibility complex class I-related gene protein-like.
   
 
  0.697
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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