STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASKIN1CASK interacting protein 1. (1571 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.827
ENSCPBP00000019284
FRAS1-related extracellular matrix protein 1-like.
   
  0.628
FREM1
FRAS1-related extracelluar matrix protein 1/2.
   
  0.628
MPP1
MAGUK 55 kDa erythrocyte membrane protein.
    
 0.596
APBA1
Amyloid beta A4 precursor protein-binding family A member 1.
   
 
 0.467
BAG3
BCL2 associated athanogene 3.
   
  0.428
SRP19
Signal recognition particle subunit SRP19.
   
    0.422
PTPN23
Protein tyrosine phosphatase, non-receptor type 23.
   
 0.402
MPP6
Membrane palmitoylated protein 6.
    
 0.400
MPP2
Membrane palmitoylated protein 2.
    
 0.400
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.