STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000001679Pulmonary surfactant-associated protein B-like. (157 aa)    
Predicted Functional Partners:
PRF1
Perforin 1.
   
  
 0.846
SFTPC
Surfactant protein C.
   
 
 0.732
ND5
NADH-ubiquinone oxidoreductase chain 5.
      
 0.662
ENSCPBP00000027118
Glypican-5-like.
    
 
 0.645
NKG7
Protein NKG7.
   
  
 0.594
GALC
Galactosylceramidase.
    
 
 0.574
TMEM130
Transmembrane protein 130.
   
 0.526
GBA
Glucosylceramidase beta.
   
 0.526
FASLG
Tumor necrosis factor ligand superfamily member 6.
   
  
 0.477
SRRT
Serrate, RNA effector molecule.
      
 0.475
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.