STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIEPeptidyl-prolyl isomerase E (cyclophilin E). (292 aa)    
Predicted Functional Partners:
XAB2
Pre-mRNA-splicing factor SYF1.
   
 0.999
PRPF19
pre-mRNA processing factor 19.
    
 0.999
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.995
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.994
BUD31
Bud site selection protein 31.
   
 0.993
SNW1
SNW domain-containing protein 1.
   
 0.992
RBM22
Pre-mRNA-splicing factor RBM22/SLT11.
   
 0.991
ISY1
Pre-mRNA-splicing factor ISY1.
   
  0.990
ZNF830
Zinc finger protein 830.
   
 0.987
PRCC
Papillary renal cell carcinoma (translocation-associated).
   
 0.945
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.