Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EBF1Early B-cell factor 1. (595 aa)    
Predicted Functional Partners:
EEF1G
Eukaryotic translation elongation factor 1 gamma.
    
   0.576
UFD1
Ubiquitin fusion degradation 1 like (yeast).
    
 
 0.553
ONECUT2
One cut domain family member 2.
   
 
 0.548
CPEB2
Cytoplasmic polyadenylation element binding protein 2.
      
 0.541
CPEB4
Cytoplasmic polyadenylation element binding protein 4.
      
 0.541
DACH1
Dachshund family transcription factor 1.
      
 0.535
DACH2
Dachshund family transcription factor 2.
      
 0.535
YOD1
Ubiquitin thioesterase OTU1.
    
   0.503
PLAA
Phospholipase A-2-activating protein.
    
   0.503
LHX2
LIM homeobox protein 2/9.
   
 
 0.484
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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