STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4F1Transcription factor E4F1 / E3 ubiquitin-protein ligase. (790 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
   
 0.687
SPRTN
SprT-like domain-contaning protein Spartan.
    
 
 0.578
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 
 0.571
WDR24
WD repeat-containing protein 24.
   
 
  0.567
ASL
Argininosuccinate lyase.
      
 0.552
BRAT1
BRCA1 associated ATM activator 1.
   
    0.535
ZGPAT
Zinc finger CCCH-type and G-patch domain containing.
   
    0.534
RASSF1
Ras association domain-containing protein 1.
    
 
 0.508
ENSCPBP00000031030
annotation not available
   
  0.500
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
  0.500
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.