STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S100BS100 calcium binding protein B. (92 aa)    
Predicted Functional Partners:
CAPZA1
Capping actin protein of muscle Z-line alpha subunit 1.
   
 0.967
CAPZA2
Capping actin protein of muscle Z-line alpha subunit 2.
   
 0.915
CAPZA3
Capping actin protein of muscle Z-line alpha subunit 3.
   
 0.915
ENSCPBP00000038390
Uncharacterized LOC101950057.
   
 0.829
ENSCPBP00000025357
annotation not available
   
 0.799
TP53
Tumor protein p53.
    
 
 0.737
STK38L
Serine/threonine kinase 38 like.
    
 
 0.671
STK38
Serine/threonine kinase 38.
    
 
 0.671
GFAP
Glial fibrillary acidic protein.
   
 
 0.633
SDF4
Stromal cell derived factor 4.
      
 0.580
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.