STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD2LPre-rRNA-processing protein TSR4. (466 aa)    
Predicted Functional Partners:
PRMT3
Type I protein arginine methyltransferase.
   
 
 0.800
GGN
Gametogenetin.
      
 0.637
ZNF277
Zinc finger protein 277.
   
 
 0.620
BYSL
Essential nuclear protein 1.
   
  
 0.594
WDPCP
WD repeat-containing and planar cell polarity effector protein.
    
 
 0.518
PNO1
RNA-binding protein PNO1.
   
  
 0.517
RPL4
Large subunit ribosomal protein L4e.
    
 
 0.476
LTV1
LTV1 ribosome biogenesis factor.
   
  
 0.462
ENSCPBP00000020959
annotation not available
    
 
 0.458
ENSCPBP00000025569
annotation not available
    
 
 0.458
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.