STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2NUbiquitin conjugating enzyme E2 N. (152 aa)    
Predicted Functional Partners:
UBE2V2
Ubiquitin-conjugating enzyme E2 variant.
   
 0.999
TRAF6
TNF receptor associated factor 6.
    
 0.998
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.996
ENSCPBP00000021729
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.996
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 0.996
ENSCPBP00000021501
annotation not available
   
 0.989
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
   
 0.983
RNF8
E3 ubiquitin-protein ligase RNF8.
   
 0.979
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 0.978
HLTF
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3.
    
 0.977
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.