STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000001952Cocaine esterase-like. (138 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.539
WDR43
U3 small nucleolar RNA-associated protein 5.
   
 0.525
UTP20
U3 small nucleolar RNA-associated protein 20.
   
 0.514
UTP4
U3 small nucleolar RNA-associated protein 4.
    
 0.479
UTP15
U3 small nucleolar RNA-associated protein 15.
   
 0.472
WDR75
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17).
   
  0.461
EMG1
RRNA small subunit pseudouridine methyltransferase Nep1.
   
  0.460
DCAF13
DDB1- and CUL4-associated factor 13.
   
  0.457
FCF1
U3 small nucleolar RNA-associated protein 24.
   
  0.457
UTP11
UTP11, small subunit processome component homolog (S. cerevisiae).
   
  0.455
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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