STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL42Large subunit ribosomal protein L42. (147 aa)    
Predicted Functional Partners:
MRPS18C
Mitochondrial ribosomal protein S18C.
   
 
 0.952
MRPL32
Large subunit ribosomal protein L32.
   
 
 0.948
MRPL41
Large subunit ribosomal protein L41.
   
 
 0.946
MRPS18A
Mitochondrial ribosomal protein S18A.
   
 
 0.943
MRPL20
Large subunit ribosomal protein L20.
   
 
 0.936
MRPL13
Large subunit ribosomal protein L13.
   
   0.927
MRPL40
Large subunit ribosomal protein L40.
   
 
 0.926
MRPL37
Large subunit ribosomal protein L37.
    
 
 0.924
MRPL16
Large subunit ribosomal protein L16.
    
 0.920
MRPL47
Large subunit ribosomal protein L47.
   
 
 0.919
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.