STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIDT1SID1 transmembrane family member 1. (830 aa)    
Predicted Functional Partners:
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
   
 0.767
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 0.762
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.761
ENSCPBP00000010497
annotation not available
    
 0.756
POLR2E
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.756
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
   
 0.756
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.756
POLR2H
RNA polymerase II subunit H.
    
 0.755
POLR2I
DNA-directed RNA polymerase II subunit RPB9.
    
 0.755
POLR2D
DNA-directed RNA polymerase II subunit RPB4.
    
 0.755
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.