STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP13Thyroid hormone receptor interactor 13. (435 aa)    
Predicted Functional Partners:
MAD2L1BP
MAD2L1 binding protein.
   
 
 0.955
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2.
   
 
 0.951
UBXN7
UBX domain-containing protein 7.
   
 0.950
MAD2L2
Mitotic spindle assembly checkpoint protein MAD2B.
    
 
 0.914
CDC20
Cell division cycle 20, cofactor of APC complex.
  
 
 0.903
EXO1
Exonuclease 1.
  
  
 0.860
MELK
Maternal embryonic leucine zipper kinase.
   
  
 0.821
DMC1
Meiotic recombination protein DMC1.
  
 
 0.818
CDCA5
Cell division cycle associated 5.
   
  
 0.785
NUF2
NUF2, NDC80 kinetochore complex component.
   
  
 0.767
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.