STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD4Jumonji domain containing 4. (427 aa)    
Predicted Functional Partners:
ALKBH1
Alkylated DNA repair protein alkB homolog 1.
   
  
 0.604
HSPBAP1
HSPB1 associated protein 1.
      
 0.578
RIOX1
Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66.
      
 0.576
KDM8
Lysine-specific demethylase 8.
      
0.575
ALKBH4
alkB homolog 4, lysine demethylase.
   
  
 0.572
ALKBH5
MRNA N6-methyladenine demethylase.
   
  
 0.571
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
      
 0.561
ALKBH6
Alkylated DNA repair protein alkB homolog 6.
      
 0.549
ALKBH7
Synovial sarcoma, X breakpoint 2 interacting protein.
   
  
 0.544
ETF1
Eukaryotic translation termination factor 1.
    
 
 0.535
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.