STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP23U3 small nucleolar RNA-associated protein 23. (305 aa)    
Predicted Functional Partners:
WDR43
U3 small nucleolar RNA-associated protein 5.
   
 
 0.985
KRR1
KRR1, small subunit processome component homolog.
   
 0.982
ENSCPBP00000039138
Uromodulin-like.
   
 0.982
UTP14A
U3 small nucleolar RNA-associated protein 14.
   
 
 0.947
DDX52
ATP-dependent RNA helicase DDX52/ROK1.
   
 0.936
UTP11
UTP11, small subunit processome component homolog (S. cerevisiae).
   
 
 0.933
UTP3
UTP3, small subunit processome component homolog (S. cerevisiae).
   
 
 0.917
WDR46
WD repeat domain 46.
   
 
 0.883
EMG1
RRNA small subunit pseudouridine methyltransferase Nep1.
   
 0.872
MIS18BP1
MIS18 binding protein 1.
   
 
 0.870
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.