STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA4Integrin subunit alpha 4. (1027 aa)    
Predicted Functional Partners:
ITGB7
Integrin subunit beta 7.
   
 0.981
JAM2
Junctional adhesion molecule 2.
     
 0.968
SPP1
Secreted phosphoprotein 1.
   
 0.963
ITGB1
Integrin subunit beta 1.
   
 0.963
ENSCPBP00000004266
Paxillin-like.
    
 0.949
TLN2
Talin 2.
   
 0.934
FN1
Fibronectin 1.
     
 0.917
MADCAM1
Mucosal vascular addressin cell adhesion molecule 1.
     
  0.910
VASP
Vasodilator-stimulated phosphoprotein.
     
 0.904
ITGB3
Integrin subunit beta 3.
   
 0.855
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.